Biomed Pap Med Fac Univ Palacky Olomouc Czech Repub. 2007, 151(1):3-10 | DOI: 10.5507/bp.2007.001
AMINOHYDROLASES ACTING ON ADENINE, ADENOSINE AND THEIR DERIVATIVES
- Department of Biochemistry, Faculty of Science, Palacky University, Slechtitelu 11, 783 71 Olomouc, Czech Republic
Background: Adenine and adenosine-acting aminohydrolases are important groups of enzymes responsible for the metabolic salvage of purine compounds. Several subclasses of these enzymes have been described and given current knowledge of the full genome sequences of many organisms, it is possible to identify genes encoding these enzymes and group them according to their primary structure.
Methods and Results: This article is a short overview of the enzymes classified as adenine and adenosine deaminase. It summarises knowledge of their occurrence, genetic basis and their catalytic and structural properties.
Conclusions: These enzymes are constitutive components of purine metabolism and their impairment may cause serious medical disorders. In humans, adenosine deaminase deficiency is linked to severe combined immunodeficiency and as such the enzyme has been approved for the first gene therapy trial. The role of these enzymes in plants is unclear, since the activity was has not been detected in extracts and putative genes have not been yet cloned and analyzed. A literature search and amino acid identity comparison show that Ascomycetes contain only adenine deaminase, but not adenosine deaminase, despite the fact that corresponding genes are annotated in databases as the adenosine cleaving enzymes because they share the same conserved domain.
Keywords: Adenine deaminase, Adenase, Adenosine deaminase, Aminohydrolase, Gene organization, Protein structure
Received: January 20, 2007; Accepted: May 15, 2007; Published: June 1, 2007 Show citation
References
- Murray AW. The biological signifi cance of purine salvage. Annu Rev Biochem 1971; 40:81126.
Go to original source...
Go to PubMed...
- Ribard C, Rochet M, Labedan B, Daignan-Fornier B, Alzari P, Scazzocchio C et al. Sub-families of of / barrel enzymes: a new adenine deaminase family. J Mol Biol 2003; 334:111731.
Go to original source...
Go to PubMed...
- Sugadev R, Kumaran D, Burley SK, Swaminathan S. Crystal structure of an adenine deaminase. New York Structural Genomics Research Consortium (Nysgrc), 2006/9/13 (PDB accession 2ICS).
Go to original source...
- Jun HK, Sakai T. Some properties of adenine deaminase of Pseudomonas synxantha. J Ferment Technol 1979; 57:2949.
- Nygaard P, Duckert P, Saxild HH. Role of adenine deaminase in purine salvage and nitrogen metabolism and characterisation of the ade gene in Bacillus subtilis. J Bacteriol 1996; 178:84653.
Go to original source...
Go to PubMed...
- Kidder GW, Nolan LL. Adenine aminohydrolase: occurrence and possible signifi cance in trypanosomid fl agellates. Proc Natl Acad Sci USA 1979; 76:36702.
Go to original source...
Go to PubMed...
- Matsui H, Shimaoka M, Kawasaki H, Takenaka Y, Kurahashi O. Adenine deaminase activity of the yicP gene product of Escherichia coli. Biosci Biotechnol Biochem 2001; 65:11128.
Go to original source...
Go to PubMed...
- Heppel LA, Hurwitz J, Horecker BL. Adenine deaminase of Azobacter vinelandii. J Am Chem Soc 1957; 79:6303.
Go to original source...
- Kidder GW, Dewey VC, Nolan LL. Adenine deaminase of a eukaryotic animal cell, Crithidia fasciculata. Arch Biochem Biophys 1977; 183:712.
Go to original source...
Go to PubMed...
- Sakai T, Jun HK. Purifi cation and characterisation of adenine deaminase in Pseudomonas synxantha. J Ferment Technol 1978; 56:25765.
- Deeley MC. Adenine deaminase and adenine utilization in Saccharomyces cerevisiae. J Bacteriol 1992; 174:310210.
Go to original source...
Go to PubMed...
- Dorgan KM, Wooderchak WL, Wynn DP, Karschner EL, Alfaro JF, Cui Y et al. An enzyme-coupled continuous spectrophotometric assay for S-adenosylmethionine-dependent methyltransferases. Anal Biochem 2006; 350:24955.
Go to original source...
Go to PubMed...
- Allam AM, Elawamry ZA, Elzainy TA. Discrete activities for adenine and adenosine deaminations in extracts of Streptomyces viridiviolaceus. Egypt J Bot 1981; 24:14952.
- Abbondandolo A, Weyer A, Heslot H, Lambert M. Study of adenine aminohydrolase in the yeast, Schizosaccharomyces pombe. J Bacteriol 1971; 108:95963.
Go to original source...
- Wolf J, Gerber AP and Keller W. tadA, an essential tRNA-specifi c adenosine deaminase from Escherichia coli. EMBO J 2002; 21:384151.
Go to original source...
Go to PubMed...
- Hirschhorn R, Ratech H. Isozymes of adenosine deaminase. In: Ratazzi MC, Scandalia JG, Whitt GS, editors. Current topics in biological and medical research, vol. 1. New York: Alan R. Liss; 1980. p. 13257.
- Maier SA, Galellis JR, McDermid HE. Phylogenetic analysis reveals a novel protein family closely related to adenosine deaminase. J Mol Evol 2005; 61:77694.
Go to original source...
Go to PubMed...
- Zavialov AV and Engstrom A. Human ADA2 belongs to a new family of growth factors with adenosine deaminase activity. Biochem J 2005; 391:517.
Go to original source...
Go to PubMed...
- Van der Weyden MB, Kelley WN. Human adenosine deaminase. Distribution and properties. J Biol Chem 1976; 251:544856.
Go to original source...
- Aronow BJ, Silbiger RN, Dusing MR, Stock JL, Yager KL, Potter SS, et al. Functional analysis of the human adenosine deaminase gene thymic regulatory region and its ability to generate positionindependent transgene expression. Mol Cell Biol 1992; 12:4170 85.
Go to original source...
Go to PubMed...
- Dusing MR, Wiginton DA. Sp1 is essential for both enhancermediated and basal activation of the TATA-less human adenosine deaminase promoter. Nucleic Acids Res 1994; 22:66977.
Go to original source...
Go to PubMed...
- Xie W, Duan R, Safe S. Estrogen induces adenosine deaminase gene expression in MCF-7 human breast cancer cells: role of estrogen receptor-Sp1 interactions. Endocrinology 1999; 140:21927.
Go to original source...
Go to PubMed...
- Keegan LP, Leroy A, Sproul D and O'Connell MA. Adenosine deaminases acting on RNA (ADARs): RNA-editing enzymes. Genome Biol 2004; 5:209.
Go to original source...
Go to PubMed...
- Ataie G, Safarian S, Divsalar A, Saboury AA, Moosavi-Movahedi AA, Ranjbar B, et al. Kinetic and structural analysis of the inhibition of adenosine deaminase by acetaminophen. J Enzyme Inhib Med. Chem 2004; 19:718.
Go to original source...
Go to PubMed...
- Nygaard P. Adenosine deaminase from Escherichia coli. Methods Enzymol 1978; 51:50812.
Go to original source...
Go to PubMed...
- Iwaki-Egawa S, Watanabe Y. Characterization and purifi cation of adenosine deaminase 1 from human and chicken liver. Comp Biochem Physiol B Biochem Mol Biol 2002; 133:17382
Go to original source...
Go to PubMed...
- Tsukada T, Yoshino M. Adenosine deaminase from Azotobacter vinelandii. Purification and properties. Arch Microbiol 1980; 128:22832.
Go to original source...
Go to PubMed...
- Pickard MA. Purification and some properties of the soluble and membrane-bound adenosine deaminases of Micrococcus sodonensis ATCC 11880 and their distribution within the family Micrococcacea. Can J Biochem 1975; 53:34453.
Go to original source...
Go to PubMed...
- Ling F, Inoue Y, Kimura A. Purifi cation and characterization of adenosine deaminase from Klebsiella sp. LF 1202. J Ferment Bioeng 1991; 71:8992.
Go to original source...
- Rosinová M, Zelinková E, Zelinka J. (1978) Adenosine aminohydrolase from Streptomyces aureofaciens. Collect Czech Chem Commun 1978; 43:23249.
Go to original source...
- Jun HK, Kim TS, Yeeh Y. Purifi cation and characterization of an extracellular adenosine deaminase from Nocardioides sp. J-326TK. Biotechnol Appl Biochem 1994; 20:26577.
- Jun HK, Kim TS, Sakai T. Purifi cation and characterization of extracellular adenosine deaminase from a Streptomyces sp. J Ferment Bioeng 1991; 71:611.
Go to original source...
- Hough RF, Bass BL. Purifi cation of the Xenopus laevis doublestranded RNA adenosine deaminase. J Biol Chem 1994; 269:9933 9.
Go to original source...
- Keegan LP, Gerber AP, Brindle J, Leemans R, Gallo A, Keller W et al. The properties of a tRNA-specifi c adenosine deaminase from Drosophila melanogaster support an evolutionary link between pre-mRNA editing and tRNA modifi cation. Mol Cell Biol 2000; 20:82533.
Go to original source...
Go to PubMed...
- Lupidi G, Marmocchi F, Cristalli G. Inhibition studies on membrane adenosine deaminase from human placenta. Biochem Mol Biol Int 1998; 46:107180.
Go to original source...
- Abu-Shady MR, Elshafei AM, el-Beih FM, Mohamed LA. Properties of adenosine deaminase in extracts of Aspergillus terricola. Acta Microbiol Pol 1994; 43:30511.
- Gabellieri E, Bernini S, Piras L, Cioni P, Balestreri E, Cercignani G et al. Purifi cation, stability and kinetic properties of highly purifi ed adenosine deaminase from Bacillus cereus NCIB 8122. Biochim Biophys Acta 1986; 884:4906.
Go to original source...
Go to PubMed...
- Harbison GR, Fisher JR. Purifi cation, properties and temperature dependence of the adenosine deaminase from a poikilotherm (Bay scallop). Arch Biochem Biophys 1973; 154:8195.
Go to original source...
Go to PubMed...
- Challa A, Johnson S, Robertson K, Gunasekaran M. Properties of adenosine deaminase from Candida albicans. J Basic Microbiol 1999; 39:97101.
Go to original source...
Go to PubMed...
- Singh LS, Sharma R. Purifi cation and characterization of intestinal adenosine deaminase from mice. Mol Cell Biochem 2000; 204:12734.
Go to original source...
Go to PubMed...
- Rossi CA, Lucacchini A. Purifi cation and some properties of calf thymus adenosine deaminase. Biochem Soc Trans 1974; 2:13135.
Go to original source...
- Alrokayan S. Purifi cation and characterization of adenosine deaminase from camel skeletal muscle. Int J Biochem Cell Biol 2002; 34:160818.
Go to original source...
Go to PubMed...
- Daddona PE, Wiesmann WP, Lambros C, Kelley WN, Webster HK. Human malaria parasite adenosine deaminase. Characterization in host enzyme-defi cient erythrocyte culture. J Biol Chem 1984; 259:14725.
Go to original source...
- Iwaki-Egawa S, Namiki C, Watanabe Y. Adenosine deaminase 2 from chicken liver: purifi cation, characterization, and N-terminal amino acid sequence. Comp Biochem Physiol B Biochem Mol Biol 2004; 137:24754.
Go to original source...
Go to PubMed...
- Akedo H, Nishihara H, Shinkai K, Komatsu K, Ishikawa S. Multiple forms of human adenosine deaminase. I. Purifi cation and characterization of two molecular species. Biochim Biophys Acta 1972; 276:25771.
Go to original source...
Go to PubMed...
- Agarwal RP, Parks RE. Adenosine deaminase from human erythrocytes. Methods Enzymol 1978; 67:5027.
Go to original source...
- Mardanyan SS, Sharoyan SG, Antonyan AA, Lupidi G, Cristalli G. Interaction of adenosine deaminase with inhibitors. Chemical modifi cation by diethyl pyrocarbonate. Biochemistry (Mosc). 2002; 67:7707.
Go to original source...
Go to PubMed...
- Reayi A, Hosmane RS. Inhibition of adenosine deaminase by novel 5:7 fused heterocycles containing the imidazo [4,5-e][1,2,4]triazepine ring system: a structure-activity relationship study. J Med Chem 2004; 47:104450.
Go to original source...
Go to PubMed...
- Yabuki N, Ashihara H. Catabolism of adenine nucleotides in suspension-cultured plant cells. Biochim Biophys Acta 1991; 1073:47480
Go to original source...
Go to PubMed...
- Katahira R, Ashihara H. Profi les of purine biosynthesis, salvage and degradation in disks of potato (Solanum tuberosum L.) tubers. Planta 2006; 225:11526
Go to original source...
Go to PubMed...
- Guranowski A. Purine Catabolism in Plants. Plant Physiol 1982; 70:3449
Go to original source...
Go to PubMed...
- Moffatt BA, Stevens YY, Allen MS, Snider JD, Pereira LA, Todorova MI et al. Adenosine kinase defi ciency is associated with developmental abnormalities and reduced transmethylation. Plant Physiol 2002; 128:81221.
Go to original source...
Go to PubMed...
- Moff att BA, Ashihara H. Purine and pyrimidine nucleotide synthesis and metabolism. In: Somerville CR, Meyerowitz EM, editors. The Arabidopsis Book. Rockville, MD: American Society of Plant Biologists; 2002 (April 4), doi: 10.1199/tab.0018. Available from: http://www.aspb.org/publications/arabidopsis/
Go to original source...
- Pospisilova H, Novak O, Frebortova J, Strnad M, Frebort I. Oxidative and hydrolytic cleavage of cytokinin derivatives with biomedical and biotechnological potential. In: Abstracts of International Symposium of Fifth 21st Century COE Towards Creating New Industries Based on Inter-Nanoscience. 2006, December 8-9, Awaji, Japan; p. 1520.
- Polmae SH. Enzyme replacement and other biochemical approaches to the therapy of adenosine deaminase defi ciency. Ciba Found Symp 1978; 68:21330.
- Gaspar HB, Bjorkegren E, Parsley K, Gilmour KC, King D, Sinclair J et al. Successful reconstitution of immunity in ADA-SCID by stem cell gene therapy following cessation of PEG-ADA and use of mild preconditioning. Mol Ther 2006; 14:50513.
Go to original source...
Go to PubMed...
- Blaese RM, Culver KW, Miller AD, Carter CS, Fleisher T, Clerici M et al. T lymphocyte-directed gene therapy for ADA- SCID: initial trial results after 4 years. Science 1995; 270:47580.
Go to original source...
Go to PubMed...
- Calis M, Ates F, Yazici C, Kose K, Kirnap M, Demir M et al. Adenosine deaminase enzyme levels, their relation with disease activity, and the eff ect of colchicine on adenosine deaminase levels in patients with Behcet's disease. Rheumatol Int 2005; 25:4526.
Go to original source...
Go to PubMed...
- Hsu LCh, Liu S, Abedinpour F, Beech RD, Lahti JM, Kidd VJ et al. The murine G+C-rich promoter binding protein mGPBP is required for promoter-specifi c transcription. Mol Cell Biol 2003; 23:877385.
Go to original source...
Go to PubMed...
- Hall TA. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucl Acids Symp Ser 1999; 41:958.